Метагеномика

• Андреева А.С., Тотменина О.Д., Кабанов А.С., Антонец М.Е., Боднев С.А., Трегубчак Т.В., Аликина Т.Ю., Батурина О.А., Бауэр Т.В., Ребус М.Е., Сафатов А.С., Кабилов М.Р. Оценка патогенного потенциала микроорганизмов атмосферных аэрозолей. Здоровье населения и среда обитания 2024. 32. 4. 27–36
• Лаврентьева Е.В., Раднагуруева А.А., Батурина О.А., Хахинов В.В. Таксономическое разнообразие микробного сообщества в термальном источнике Кучигер (Байкальская рифтовая зона). Сибирский Экологический Журнал 2024. 31. 1. 30–40
• Масленникова В.С., Пыхтина М.Б., Табанюхов К.А., Шелихова Е.В., Мосалев К.И., Катохин А.В., Бондарь А.А., Беклемишев А.Б., Воевода М.И. Распространенность и видовой состав вирусов картофеля в Новосибирской области. Вавиловский Журнал Генетики и Селекции 2024. 28. 5. 554–562
• Сафатов А.С., Лаптева Н.А., Олькин С.Е., Андреева И.С., Буряк Г.А., Ребус М.Е., Резникова И.К., Аликина Т.Ю., Батурина О.А., Кабилов М.Р. Зависимость концентрации культивируемых микроорганизмов и суммарного белка от метеоусловий в окрестностях г. Новосибирска. Оптика Атмосферы И Океана 2024. 37. 6 (425). 468–474
• Терещенко Д.С., Гризанова Е.В., Шелихова Е.В., Аликина Т.Ю., Кабилов М.Р., Дубовский И.М. Сравнительный анализ иммунного ответа, кишечной микробиоты и восприимчивости к бактериям Bacillus thuringiensis у колорадского жука Leptinotarsa decemlineata. Журнал эволюционной биохимии и физиологии 2024. 60. 6. 649–664
• Andreeva I., Safatov A., Totmenina O., Olkin S., Rebus M., Buryak G., Alikina T., Baturina O., Kabilov M. Three-Year Monitoring of Microorganisms’ Composition and Concentration in Atmospheric Aerosols of Novosibirsk City and Suburbs. Microorganisms 2024. 12. 10. 2068
• Baturina O., Naumova N., Tupikin A., Dmitrienko E., Silnikov V., Kabilov M. Short-Term Changes in Fecal Bacteriobiome of Healthy Laboratory Mice After Antiviral Preparation Administration. Drugs and Drug Candidates 2024. 3. 4. 879–889
• Kurskaya O.G., Prokopyeva E.A., Dubovitskiy N.A., Solomatina M.V., Sobolev I.A., Derko A.A., Nokhova A.R., Anoshina A.V., Leonova N.V., Simkina O.A., Komissarova T.V., Tupikin A.E., Kabilov M.R., Shestopalov A.M., Sharshov K.A. Genetic Diversity of the Human Adenovirus C Isolated from Hospitalized Children in Russia (2019–2022). Viruses 2024. 16. 3. 386
• Lavrentyeva E.V., Radnagurueva A.A., Baturina O.A., Khakhinov V.V. Taxonomic Diversity of the Microbial Community in the Kuchiger Thermal Spring (Baikal Rift Zone). Contemp. Probl. Ecol. 2024. 17. 1. 24–31
• Lukyanov V., Gaysina L., Bukin Y., Renganathan P., Tupikin A. DNA-metabarcoding of cyanobacteria and microalgae in chernozem soils of temperate continental climate of the forest-steppe zone of Eurasia under different degrees of agrotechnology intensification. World J Microbiol Biotechnol 2024. 40. 351
• Melekhina E.N., Belykh E.S., Kanev V.A., Taskaeva A.A., Tarabukin D.V., Zinovyeva A.N., Velegzhaninov I.O., Rasova E.E., Baturina O.A., Kabilov M.R., Markarova M.Y. Soil Microbiome in Conditions of Oil Pollution of Subarctic Ecosystems. Microorganisms 2024. 12. 1. 80
• Murashkina T., Sharshov K., Gadzhiev A., Petherbridge G., Derko A., Sobolev I., Dubovitskiy N., Loginova A., Kurskaya O., Kasianov N., Kabilov M., Mine Ju., Uchida Yu., Tsunekuni R., Saito T., Alekseev A., Shestopalov A. Avian Influenza Virus and Avian Paramyxoviruses in Wild Waterfowl of the Western Coast of the Caspian Sea (2017–2020). Viruses 2024. 16. 4. 598
• Naumova N., Barsukov P., Baturina O., Rusalimova O., Kabilov M. Addition of Chicken Litter Compost Changes Bacteriobiome in Fallow Soil. Applied Microbiology 2024. 4. 3. 1268–1282
• Potapov S.A., Tupikin A.E., Tikhonova I.V., Zhuchenko N.A., Belykh O.I. Search for putative complete and nearcomplete genomes of DNA-containing viruses in metagenomes obtained from the Lake Baikal. Limnology and Freshwater Biology 2024. 4. 1050–1065

Геномика бактерий и вирусов

• Kozlova A.P., Muntyan V.S., Vladimirova M.E., Saksaganskaia A.S., Kabilov M.R., Gorbunova M.K., Gorshkov A.N., Grudinin M.P., Simarov B.V., Roumiantseva M.L. Soil Giant Phage: Genome and Biological Characteristics of Sinorhizobium Jumbo Phage. International Journal of Molecular Sciences 2024. 25. 13. 7388
• Kryukov V., Kosman E., Slepneva I., Vorontsova Y., Polenogova O., Kazymov G., Alikina T., Akhanaev Y., Sidorenko D., Noskov Y., Krivopalov A., Kabilov M., Yaroslavtseva O. Involvement of bacteria in the development of fungal infections in the Colorado potato beetle. Insect Science 2024. 0. 1–21
• Roumiantseva M.L., Vladimirova M.E., Saksaganskaia A.S., Muntyan V.S., Kozlova A.P., Afonin A.M., Baturina O.A., Simarov B.V. Detailed Genome Screening of a Highly Efficient Diploid Alfalfa Symbiont Ensifer meliloti L6-AK89, In: Research Advances and Challenges in Agricultural Sciences, B P International, 2024, 49–104
• Zakalyukina Y.V., Alferova V.A., Nikandrova A.A., Kiriy A.R., Chernyshova A.P., Kabilov M.R., Baturina O.A., Biryukov M.V., Sergiev P.V., Lukianov D.A. Genomic and Phenotypic Characterization of Streptomyces sirii sp. nov., Amicetin-Producing Actinobacteria Isolated from Bamboo Rhizospheric Soil. Microorganisms 2024. 12. 12. 2628

Молекулярная биология и биотехнология

• Bashmakova E.E., Kudryavtsev A.N., Tupikin A.E., Kabilov M.R., Sokolov A.E., Frank L.A. Bioluminescent aptamer-based microassay for detection of melanoma inhibitory activity protein (MIA). Analytical Methods 2024. 16. 26. 4234–4239
• Bulkhin A.O., Zykov V.V., Boyandin A.N., Marchenko D.N., Anishchenko O.V., Kabilov M.R., Rogozin D.Y. Polyunsaturated long-chain alkenones in the lake sediments of North-Minusinsk valley (southern Siberia) as a paleo-indicator of climate change. Limnology and Freshwater Biology 2024. 4. 286–291
• Dyrkheeva N.S., Zakharenko A.L., Malakhova A.A., Okorokova L.S., Shtokalo D.N., Medvedev S.P., Tupikin A.A., Kabilov M.R., Lavrik O.I. Transcriptomic analysis of HEK293A cells with a CRISPR/Cas9-mediated TDP1 knockout. Biochimica et Biophysica Acta (BBA) - General Subjects 2024. 1868. 7. 130616
• Kiselev I., Kulakova O., Baturina O., Kabilov M., Boyko A., Favorova O. Different genome-wide DNA methylation patterns in CD4+ T lymphocytes and CD14+ monocytes characterize relapse and remission of multiple sclerosis: Focus on GNAS. Multiple Sclerosis and Related Disorders 2024. 91. 105910
• Krasitskaya V.V., Vereschagina T.A., Smoliarova T.E., Sokolov A.E., Tupikin A.E., Dominguez-Arca V., Frank L.A. Development and Characterization of Novel DNA Aptamers Specific to Heart-Type Fatty Acid Binding Protein (hFABP). Journal of Siberian Federal University. Biology 2024. 17. 3. 302–319
• Maslov D.E., Timoshchuk A.N., Bondar A.A., Golubev M.P., Soplenkova A.G., Hanic M., Sharapov S.Z., Leonova O.N., Aulchenko Y.S., Golubeva T.S. Fast and Simple Protocol for N-Glycome Analysis of Human Blood Plasma Proteome. Biomolecules 2024. 14. 12. 1551
• Shanshin D.V., Borisevich S.S., Shaprova O.N., Nesmeyanova V.S., Bondar A.A., Porozov Y.B., Khamitov E.M., Kolosova E.A., Shelemba A.A., Ushkalenko N.D., Protopopova E.V., Sergeev A.A., Loktev V.B., Shcherbakov D.N. Phage Display Revealed the Complex Structure of the Epitope of the Monoclonal Antibody 10H10. International Journal of Molecular Sciences 2024. 25. 19. 10311
• Shatunova E.A., Rychkova A.S., Meschaninova M.I., Kabilov M.R., Tupikin A.E., Kurochkina Y.D., Korolev M.A., Vorobyeva M.A. Novel DNA Aptamers to Dickkopf-1 Protein and Their Application in Colorimetric Sandwich Assays for Target Detection in Patients with Axial Spondyloarthritis. International Journal of Molecular Sciences 2024. 25. 22. 12214
• Tian Y., Babaylova E.S., Gopanenko A.V., Tupikin A.E., Kabilov M.R., Malygin A.A. Deficiency of the ribosomal protein uS10 (RPS20) reorganizes human cells translatome according to the abundance, CDS length and GC content of mRNAs. Open Biology 2024. 14. 1. 230366

Геномика эукариот

• Borisova T.V., Cherdonova A.M., Pshennikova V.G., Teryutin F.M., Morozov I.V., Bondar A.A., Baturina O.A., Kabilov M.R., Romanov G.P., Solovyev A.V., Fedorova S.A., Barashkov N.A. High prevalence of m.1555A > G in patients with hearing loss in the Baikal Lake region of Russia as a result of founder effect. Sci Rep 2024. 14. 1. 15342
• Nuzhdina N.S., Erofeeva A.S., Bondar A.A., Kovtonyuk N.K. DNA barcoding of some endangered plant species of the Altai Mountains based on five genetic markers. Botanica Pacifica: A Journal of Plant Science and Conservation 2024. 13. 1. 193–196