2022 [Институт химической биологии и фундаментальной медицины]
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2022

2022


Метагеномика

  • Grodnitskaya I.D., Karpenko L.V., Pashkeeva O.E., Goncharova N.N., Startsev V.V., Baturina O.A., Dymov A.A. Impact of Forest Fires on the Microbiological Properties of Oligotrophic Peat Soils and Gleyed Peat Podzols of Bogs in the Northern Part of the Sym-Dubches Interfluve, Krasnoyarsk Region. Eurasian Soil Science 2022. 55. 4. 460–473
  • Lysko S.B., Baturina O.A., Naumova N.B., Lescheva N.A., Pleshakova V.I., Kabilov M.R. No-Antibiotic-Pectin-Based Treatment Differently Modified Cloaca Bacteriobiome of Male and Female Broiler Chickens. Agriculture 2022. 12(1). 24. 1–16
  • Naumova N., Barsukov P., Baturina O., Rusalimova O., Kabilov M. Soil Mycobiome Diversity under Different Tillage Practices in the South of West Siberia. Life 2022. 12(8). 1169. 1–17
  • Naumova N., Baturina O., Nechaeva T., Kabilov M. Root and Rhizosphere Microbiome of Tomato Plants Grown in the Open Field in the South of West Siberia under Mineral Fertilization. Horticulturae 2022. 8(11). 1051. 1–19
  • Naumova N., Kuznetsova G., Alikina T., Kabilov M. Cambisol Mycobiome in a Long-Term Field Experiment with Korean Pine as a Sole Edificator: A Case Study. Applied Microbiology 2022. 2. 3. 470–480
  • Букин Ю.С., Кравцова Л.С., Перетолчина Т.Е., Федотов А.П., Тупикин А.Е., Кабилов М.Р., Щербаков Д.Ю., Минчева Е.В. ДНК-метабаркодинг бентосных водорослей и ассоциированных с ними эукариот оз. Байкал в условиях быстрых экологических изменений. Вавиловский журнал генетики и селекции 2022. 26. 1. 86–95
  • Кулыгина Ю.А., Осипенко М.Ф., Аликина Т.Ю. Особенности микробиоты у пациентов с болезнью Крона в зависимости от наличия синдрома избыточного бактериального роста. РМЖ. Медицинское Обозрение 2022. 6. 5. 221–226
  • Наумова Н.Б., Кабилов М.Р. О биоразнообразии микробиома воздуха. Acta Naturae 2022. 14. 4. 50–56


Геномика бактерий и вирусов

  • Andreeva I.S., Baturina O.A., Safatov A.S., Solovyanova N.A., Alikina T.Y., Puchkova L.I., Rebus M.E., Buryak G.A., Olkin S.E., Kozlov A.S., Kabilov M.R. Concentration and Composition of Cultured Microorganisms in Atmospheric Air Aerosols in Novosibirsk Depending on the Season. Atmospheric and Oceanic Optics 2022. 35. 6. 667–672
  • Lukianova A.A., Evseev P.V., Shneider M.M., Dvoryakova E.A., Tokmakova A.D., Shpirt A.M., Kabilov M.R., Obraztsova E.A., Shashkov A.S., Ignatov A.N., Knirel Y.A., Dzhalilov F.S.U., Miroshnikov K.A. Pectobacterium versatile Bacteriophage Possum: A Complex Polysaccharide-Deacetylating Tail Fiber as a Tool for Host Recognition in Pectobacterial Schitoviridae. International Journal of Molecular Sciences 2022. 23(19). 11043. 1–18
  • Roumiantseva M.L., Vladimirova M.E., Saksaganskaia A.S., Muntyan V.S., Kozlova A.P., Afonin A.M., Baturina O.A., Simarov B.V. Ensifer meliloti L6-AK89, an Effective Inoculant of Medicago lupulina Varieties: Phenotypic and Deep-Genome Screening. Agronomy 2022. 12(4). 766. 1–33
  • Shanshin D.V., Borisevich S.S., Bondar A.A., Porozov Y.B., Rukhlova E.A., Protopopova E.V., Ushkalenko N.D., Loktev V.B., Chapoval A.I., Ilyichev A.A., Shcherbakov D.N. Can Modern Molecular Modeling Methods Help Find the Area of Potential Vulnerability of Flaviviruses? International Journal of Molecular Sciences 2022. 23(14). 7721. 1–14
  • Vladimirova M.E., Muntyan V.S., Afonin A.M., Muntyan A.N., Baturina O.A., Dzuybenko E.A., Saksaganskaya A.S., Simarov B.V., Roumiantseva M.L., Kabilov M.R. Complete Genome of Sinorhizobium meliloti AK76, a Symbiont of Wild Diploid Medicago lupulina from the Mugodgary Mountain Region. Microbiology Resource Announcements 2022. 11(3). e01088-21. 1–2


Молекулярная биология и биотехнология

  • Комарова Е.С., Донцова О.А., Пышный Д.В., Кабилов М.Р., Сергиев П.В. Flow-seq-метод: особенности и применение в изучении бактериальной трансляции. Acta Naturae 2022. 14. 4. 20–37
  • Komarova E.S., Slesarchuk A.N., Rubtsova M.P., Osterman I.A., Tupikin A.E., Pyshnyi D.V., Dontsova O.A., Kabilov M.R., Sergiev P.V. Flow-Seq Evaluation of Translation Driven by a Set of Natural Escherichia coli 5′-UTR of Variable Length. International Journal of Molecular Sciences 2022. 23(20). 12293. 1–9
  • Kossinova O.A., Gopanenko A.V., Babaylova E.S., Tupikin A.E., Kabilov M.R., Malygin A.A., Karpova G.G. Reorganization of the Landscape of Translated mRNAs in NSUN2-Deficient Cells and Specific Features of NSUN2 Target mRNAs. International Journal of Molecular Sciences 2022. 23(17). 9740. 1–18
  • Balabova D.V., Rudometov A.P., Belenkaya S.V., Belov A.N., Koval A.D., Bondar A.A., Bakulina A.Yu., Rukhlova E.A., Elchaninov V.V., Shcherbakov D.N. Biochemical and technological properties of moose (Alces alces) recombinant chymosin. Vavilov Journal of Genetics and Breeding 2022. 26. 3. 240–249
  • Tian Y., Babaylova E.S., Gopanenko A.V., Tupikin A.E., Kabilov M.R., Malygin A.A., Karpova G.G. Changes in the Transcriptome Caused by Mutations in the Ribosomal Protein uS10 Associated with a Predisposition to Colorectal Cancer. International Journal of Molecular Sciences 2022. 23(11). 6174. 1–17
  • Merkuleva Iu.A., Shcherbakov D.N., Andreeva I.S., Bondar A.A. Screening of Bacillus thuringiensis natural isolates to find promising variants of phosphatidylcholine-specific phospholipase C. AIP Conference Proceedings 2022. 2390. 030056. 1–5
  • Merkuleva Iu.A., Shcherbakov D.N., Bondar A.A. Development of recombinant phosphatidylcholine-specific phospholipase C from Bacillus thuringiensis. AIP Conference Proceedings 2022. 2390. 030057. 1–5


Геномика эукариот

  • Kiselev I., Danilova L., Baulina N., Baturina O., Kabilov M., Boyko A., Kulakova O., Favorova O. Genome-wide DNA methylation profiling identifies epigenetic changes in CD4+ and CD14+ cells of multiple sclerosis patients. Multiple Sclerosis and Related Disorders 2022. 60. 103714. 1–8
  • Kiselev I.S., Kulakova O.G., Danilova L.V., Baturina O.A., Kabilov M.R., Popova E.V., Boyko A.N., Favorova O.O. Genome-Wide Analysis of DNA Methylation in Cd4+ T Lymphocytes of Patients with Primary Progressive Multiple Sclerosis Indicates Involvement of This Epigenetic Process in the Disease Immunopathogenesis. Molecular Biology 2022. 56. 3. 417–423
  • Lomakin Y.A., Zvyagin I.V., Ovchinnikova L.A., Kabilov M.R., Staroverov D.B., Mikelov A., Tupikin A.E., Zakharova M.Y., Bykova N.A., Mukhina V.S., Favorov A.V., Ivanova M., Simaniv T., Rubtsov Y.P., Chudakov D.M., Zakharova M.N., Illarioshkin S.N., Belogurov A.A., Gabibov A.G. Deconvolution of B cell receptor repertoire in multiple sclerosis patients revealed a delay in tBreg maturation. Frontiers in Immunology 2022. 13. 803229. 1–15
  • Romanenko S.A., Prokopov D.Y., Proskuryakova A.A., Davletshina G.I., Tupikin A.E., Kasai F., Ferguson-Smith M.A., Trifonov V.A. The Cytogenetic Map of the Nile Crocodile (Crocodylus niloticus, Crocodylidae, Reptilia) with Fluorescence In Situ Localization of Major Repetitive DNAs. International Journal of Molecular Sciences 2022. 23(21). 13063. 1–14
  • Sinitsky M., Sinitskaya A., Shishkova D., Tupikin A., Asanov M., Khutornaya M., Kabilov M., Ponasenko A. Identification of Key Genes and Pathways in Genotoxic Stress Induced Endothelial Dysfunction: Results of Whole Transcriptome Sequencing. Biomedicines 2022. 10(9). 2067. 1–15
  • Tamkovich S., Tupikin A., Kozyakov A., Laktionov P. Size and Methylation Index of Cell-Free and Cell-Surface-Bound DNA in Blood of Breast Cancer Patients in the Contest of Liquid Biopsy. International Journal of Molecular Sciences 2022. 23(16). 8919. 1–12
  • Tutanov O., Shtam T., Grigor’eva A., Tupikin A., Tsentalovich Y., Tamkovich S. Blood Plasma Exosomes Contain Circulating DNA in Their Crown. Diagnostics 2022. 12(4). 854. 1–14
  • Vlasenko A.V., Vlasenko V.A., Kabilov M.R. A new species of Diacheopsis from Russia. Phytotaxa 2022. 541. 2. 193–200
  • Ломакин Я.А., Овчинникова Л.А., Захарова М.Н., Иванова М.В., Симанив Т.О., Кабилов М.Р., Быкова Н.А., Мухина В.С., Каминская А.Н., Тупикин А.Е., Захарова М.Ю., Фаворов А.В., Иллариошкин С.Н., Белогуров А.А., Габибов А.Г. Смещение репертуара генов зародышевой линии В-клеточных рецепторов при рассеянном склерозе. Acta Naturae 2022. 14. 4. 84–93


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