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Публикации


Публикации

Публикации 2025









  1. Orthoflavivirus omskense NS1 Protein Induces Microvascular Endothelial Permeability In Vitro. Kravchuk B.I., Matveev A.L., Kechin A.A., Stepanova A.O., Emelyanova L., Khachatryan S.M., Tikunova N.V., Khlusevich Y.A. Viruses. 2025. V. 17. P. 923. DOI: 10.3390/v17070923
  2. High-mobility group protein B1 (HMGB1) level in plasma of alcohol use disorder patients in withdrawal state. Tolmacheva A.S., Bobrik D.V., Melamud M.M., Efremov I.S., Nevinsky G.A., Buneva V.N., Akhmetova E.A., Asadullin A.R., Ermakov E.A. Middle East Current Psychiatry. 2025. V. 31. N 1. P. 41. DOI: 10.1186/s43045-025-00537-7
  3. Ribosome Disorganization and Other Effects of Artifitial RNAse DL412 on Salmonella enterica Cells. Applied Biochemistry and Microbiology Grigoryeva A.E., Tupitsyna A.V., Ryabova E.S., Bardasheva A., Zadvornykh D.A., Koroleva L.S., Silnikov V.N., Ryabchikova E.I. Applied biochem. and microbiol. 2025. V. 61.N 2. P. 228-237. DOI: 10.1134/S0003683824606073
  4. Шпагина Л.А. , Зенкова М.А. , Сапрыкин А.И. , Логашенко Е.Б. , Шпагин И.С. , Котова О.С. , Цыганкова А.Р. , Кондюрина Е.Г., Зеленская В.В., Кузнецова Г.В., Аникина Е.В., Камнева Н.В., Сергеев В.А., Суровенко Т.Н. Ремоделирование сосудов и эндотелиальная дисфункция у больных профессиональной хронической обструктивной болезнью лёгких, связанной с воздействием промышленных аэрозолей с наночастицами. Российский медицинский журнал. 2025. V.31. N2. P.127–138. DOI: 10.17816/medjrf643283
  5. Platinum polyoxoniobate: Stability, cytotoxicity and cellular uptake. Yudkina A.V., Vokhtantsev I.P., Rychkov D.A., Volchek V.V., Abramov P.A., Sokolov M.N., Zharkov D.O. Russian Journal of Bioorganic Chemistry. 2025. V. 51. N 2. P. 693-701. DOI: 10.1134/S1068162024606141 перевод
  6. Полиоксониобат платины: стабильность, цитотоксичность и поглощение клетками. Юдкина А.В., Вохтанцев И.П., Рычков Д.А., Волчек В.В., Абрамов П.А., Соколов М.Н., Жарков Д.О. Биоорганическая химия. 2025. Т. 51. № 2 С. 362-372. DOI: 10.31857/S0132342325020141
  7. Варианты нуклеотидной последовательности в генах IL4 и TNFa у пациентов с дерматозами и ксерозом. Макеенко О.А., Еремина А.А, Ковалевская-Кучерявенко Т.В., Кох Н.В., Воронина Е.Н., Юрина Н.В., Сергеева И.Г. Клиническая дерматология и венерология. 2025. Т. 24. № 2. С. 178‑184. DOI: 10.17116/klinderma202524021178
  8. From Cell Lines to Patients: Dissecting the Proteomic Landscape of Exosomes in Breast Cancer. Shefer A.A., Yanshole L.V., Proskura K., Tutanov O.S., Yunusova N., Grigoryeva A.E., Tsentalovich Yu., Tamkovich S.N. Diagnostics. 2025. V. 15. N 8. P. 1028. DOI: 10.3390/diagnostics15081028
  9. Сигнальные каскады – мишени для терапии рака молочной железы в свете данных полногеномного секвенирования. Гуляева Л.Ф., Филипенко М.Л., Кушлинский Н.Е. Успехи молекулярной онкологии. 2025. Т. 12. № 1. С. 8–13. DOI: 10.17650/2313-805X-2025-12-1-8-13
  10. Progress in the Study of Chemical Constituents of Actaea cimicifuga and Actaea erythrocarpa and Their Biological Potential. Erst A.S., Petrova N.V., Chernonosov A.A., Kaidash O.A., Sheikin V.V., Leonova T.V., Shaldaeva T.M., Gusar A.S., Koval V.V., Udut E.V., Xiang K., Yuan Y., Wang W., Kostikova V.A. Int. J. Mol. Sci. 2025. V. 26. N 10. P. 4768. DOI: 10.3390/ijms26104768
  11. Modeling Alzheimer’s Disease: A Review of Gene-Modified and Induced Animal Models, Complex Cell Culture Models, and Computational Modeling. Timofeeva A.M., Aulova K.S., Nevinsky G.A. Brain Sciences. 2025. V. 15. N 5. P. 486. DOI: 10.3390/brainsci15050486
  12. Key thermodynamic characteristics of Cas9 and Cas12a endonucleases’ cleavage of a DNA substrate containing a nucleotide mismatch in the region complementary to RNA . Biochemical and Biophysical Research Communications. Baranova S.V., Zhdanova P.V., Pestryakov P.E., Chernonosov A.A., Koval V.V. Biochem. and Biophys.Res. Com. 2025. V. 768. P. 151892. DOI: 10.1016/j.bbrc.2025.151892
  13. The influence of maximal androgen blockade and radical prostatectomy on urinary extracellular vesicle miRNA expression. Shutko E.V., Bryzgunova O.E., Ostaltsev I., Laktionov P.P., Konoshenko M.Y. Medical Oncology. 2025. V. 42. N 6. P. 185. DOI: 10.1007/s12032-025-02730-4
  14. My NGS and Other Animals Kabilov M.R. Int. J. Mol. Sci. 2025. V. 26. N 9. P. 4111. DOI: 10.3390/ijms26094111
  15. Анализ ассоциаций генотипов rs2305948 гена KDR (VEGFR2), степени коллатерального коронарного кровотока и интенсивности статинотерапии с отдаленным прогнозом у больных инфарктом миокарда. Воробьев А.С., Лифшиц Г.И., Урванцева И.А., Донников М.Ю., Коваленко Л.В., Зеленская Е.М., Астраханцева И.Д., Марков И.В., Николаев К.Ю. Атеросклероз. 2025. Т. 21. № 1. С. 49-59. DOI: 10.52727/2078-256X-2025-21-1-49-59
  16. Novel multitarget LAMP and PCR assays for the detection of Bordetella species. Koryukov M.A., Oskorbin I.P., Gordukova M.A., Turina I., Aminova I.A., Filipenko M.L. Methods. 2025. V. 240. P. 63-72. DOI: 10.1016/j.ymeth.2025.04.005
  17. Immune Response and Production of Abzymes in Patients with Autoimmune and Neurodegenerative Diseases (обзор). Nevinsky G.A. Biochemistry (Moscow) supplement series B: biomedical chemistry. 2025. V. 90. Suppl. 1. P. S373-S400. DOI: 10.1134/S0006297924604167
  18. Spectrum of Ixodidae Ticks Attacking Humans in Novosibirsk Province, Russian Siberia, and Their Association with Tick-Borne Bacterial Agents. Rar V. , Chicherina G., Igolkina Y. , Fedorets V. , Epikhina T. , Tikunova N. Pathogens. 2025. V.14. N4. 315. DOI: 10.3390/pathogens14040315
  19. Developing plant-derived DNA repair enzyme resourcesthrough studying the involvement of base excision repair DNA glycosylases in stress responses of plants (обзор). Zhao Y, Chen D., Грин И.Р., Жарков Д.О., Yu B. Physiol. Plant. 2025. P. 1-12. DOI: 10.1111/ppl.70162
  20. Exploring combined spin-labeling approach for structural studies of mRNA in the human ribosome. Kolokolov M., Malygin A.A., Graifer D.M., Meschaninova M.I., Vorobyeva M.A., Fedin M.V., Babaylova E.S., Bagryanskaya E.G. J. Chem. Phys. 2025. V. 162. N.11. P. 115103. DOI: 10.1063/5.0245722
  21. Роль полиморфизма гена HLA-G в формировании патологии в системе “мать – плод”. Гордеева Л.А., Воронина Е.Н., Поленок Е.Г., Мун С.А., Оленникова Р.В., Гареева Ю.В., Глушков А.Н. Медицинская иммунология. 2025. Т. 27. № 2. С. 423-428. DOI: 10.15789/1563-0625-TRO-16887
  22. Морфологическая оценка результатов дентальной имплантации Майбородин И.В., Саркисянц Б.К., Шеплев Б.В., Майбородина В.И., Шевела А.А. Казанский медицинский журнал. 2025. Т. 106. № 2. С. 277-286. DOI: 10.17816/KMJ640899
  23. Ribosomal Proteins as Exosomal Cargo: Random Passengers or Crucial Players in Carcinogenesis? Graifer D.M., Malygin A.A., Shefer A.A., Tamkovich S.N. Advanced Biology. 2025. V. 9. N 4. e2400360. DOI: 10.1002/adbi.202400360
  24. Factors Affecting Phage–Bacteria Coevolution Dynamics. Jdeed G., Kravchuk B.I., Tikunova N.V. Viruses. 2025. V. 17. N. 2. P. 235. DOI: 10.3390/v17020235
  25. Chemotherapeutic Boron-Containing Homocysteinamides of Human Serum Albumin. Wang M., Tsyrempilov S.A., Moskalev I.A., Zakharova O., Kasatova A.I., Silnikov V.N., Godovikova T.S., Popova T.V. Russ. J. Bioorganic Chem. 2025. V. 51. N 1. P. 354–371. DOI: 10.1134/s1068162025010297
  26. Effect of immunostimulatory RNA on the fibrosis development in Bleomycin- or LPS-induced mouse models. Sen'kova A.V., Bishani А., Savin I.A., Zenkova M.A., Chernolovskaya E.L. Biochimie. 2025. V. 229. P. 9-18. DOI: DOI: 10.1016/j.biochi.2024.09.016
  27. Application of a modified lactate dehydrogenase assay to evaluate the viability of cells cultured on 3D scaffolds when commonly used assays fail. Nazarkina Z.K., Stepanova A.O., Savostyanova T.A., Laktionov P.P. Cytotechnology. 2025. V.77. N 1. P. 1-9. DOI: 10.1007/s10616-024-00670-x
  28. Thermodynamic parameters obtained for the formation of the Cas12a-RNA/DNA complex. Baranova S.V., Zhdanova P.V., Golyshev V.M., Lomzov A.A., Pestryakov P.E., Chernonosov A.A., Koval V.V. Biochem. and Biophys.Res. Com. 2025. V. 743. P. 151176. DOI: 10.1016/j.bbrc.2024.151176
  29. Phage vB_KlebPS_265 Active Against Resistant/MDR and Hypermucoid K2 Strains of Klebsiella pneumoniae. Yakubovskij V.Y., Morozova V.V., Kozlova Y.N., Tikunov A., Fedorets V.A., Zhirakovskaia E.V., Babkin I.V., Bardasheva A., Tikunova N.V. Viruses. 2025. V. 17. N 1. P. 83. DOI: 10.3390/v17010083
  30. Homologous recombination deficiency (HRD) diagnostics: underlying mechanisms and new perspectives. Kechin A.A., Koryukov M.A., Mikheeva R., Filipenko M.L. Cancer and Metastasis Reviews. 2025. V. 44. P. 19. DOI: 10.1007/s10555-024-10238-y
  31. Polyamine adducts with AP sites: Interaction with DNA polymerases and AP endonucleases. Yudkina A.V., Amanova M.M., Zharkov D.O. Chem. Res. Toxicol. 2025. V. 38. N 1. P. 102-114. DOI: 10.1021/acs.chemrestox.4c00312
  32. Synthesis and exploration of anticancer potential of spirocyclic 1,2,3-triazoline and aziridine derivatives of natural eudesmanolide isoalantolactone. Patrushev S.S., Kichkina D., Moralev A.D., Rybalova T.V., Krasnov V.I., Chernyak E.I., Zenkova M.A., Markov A.V., Shults E.E. Bioorg. Chem. 2025. P. 108124. DOI: 10.1016/j.bioorg.2025.108124
  33. Sesquiterpene Lactones as Promising Anti-Glioblastoma Drug Candidates Exerting Complex Effects on Glioblastoma Cell Viability and Proneural–Mesenchymal Transition. Markov A.V., Moralev A.D., Odarenko K.V. Biomedicines. 2025. V. 13. P. 133. DOI: 10.3390/biomedicines13010133
  34. Position-dependent effect of AP sites within an hTERT promoter G-quadruplex scaffold on quadruplex stability and repair activity of the APE1 enzyme. Savitskaya V.Y., Novoselov K.A., Dolinnaya N.G., Monakhova M.V., Snyga V.G., Diatlova E., Peskovatskova E.S., Golyshev V.M., Kitaeva M.I., Eroshenko D.A., Zvereva M.I., Zharkov D.O., Kubareva E.A. Int. J. Mol. Sci. 2025. V. 26. N 1. P. 337. DOI: 10.3390/ijms26010337
  35. Bypass of methoxyamine-adducted abasic sites by eukaryotic translesion DNA polymerases. Yudkina A.V., Novikova A.A., Stolyarenko A.D., Makarova A.V., Zharkov D.O. Int. J. Mol. Sci. 2025. V. 26. . P. 642. DOI: 10.3390/ijms26020642
  36. Plasma high-mobility group nucleosome-binding domain 1 (HMGN1) protein levels in four common rheumatic diseases: A potential biomarker of rheumatoid arthritis, The Egyptian Rheumatologist. Ermakov E.A., Tolmacheva A.S., Kon’kov V.V., Melamud M.M., Sizikov A.E., Klyaus N.A., Nevinsky G.A., Buneva V.N. Egyptian Rheumatologist. 2025. V. 47. N 2. P. 51-55. DOI: 10.1016/j.ejr.2024.12.003
  37. Optimization of Conditions for Production of Soluble E. coli Poly(A)-Polymerase for Biotechnological Applications. Oskorbin I.P., Kunova M.S., Filipenko M.L. Biology. 2025. V. 14. N 1. P. 48. DOI: 10.3390/biology14010048
  38. Jet Injection of Naked mRNA Encoding the RBD of the SARS-CoV-2 Spike Protein Induces a High Level of a Specific Immune Response in Mice. Kisakov D.N., Karpenko L.I., Kisakova L.A., Sharabrin S.V., Borgoyakova M.B., Starostina E.V., Taranov O.S., Ivleva E.K., Pyankova O.V., Zaykovskaya A.V., Dmitrienko E.V., Yakovlev V.A., Tigeeva E.V., Bauer I.A., Krasnikova S.I., Rudometova N.B., Rudometov A.P., Sergeev A.A., Ilyichev A.A. Vaccines (Basel). 2025. V. 13. N 1. P. 65. DOI: 10.3390/vaccines13010065
  39. Design, synthesis, and evaluation of dehydroabietyl imidazolidine-2,4-diones, 2,4,5-triones, and 2-thioxoimidazolidine-4,5-diones as TDP1 inhibitors and dual TDP1/TDP2 inhibitors. Kovaleva K.S., Yarovaya O.I., Gatilov Yu.V., Lastovka A.V., Chernyshova I.A., Dyrkheeva N.S., Chepanova A.A., Lavrik O.I., Salakhutdinov N.F. Archiv der Pharmazie. 2025. V. 358. N 1. P. 1-16. DOI: 10.1002/ardp.202400801
  40. Bacterial Diversity in Native Heart Valves in Infective Endocarditis. Sinitskaya A., Kostyunin A., Asanov M., Khutornaya M., Klyueva A., Poddubnyak A., Tupikin A.E., Kabilov M.R., Sinitsky M. Biomedicines. 2025. V. 13. N 1. P. 245. DOI: 10.3390/biomedicines13010245
  41. Antibodies Specific to Rheumatologic and Neurologic Pathologies Found in Patient with Long COVID. Timofeeva A.M., Klyaus N.A., Sedykh S.E., Nevinsky G.A. Rheumato. 2025. V. 5. N 1. P. 1. DOI: 10.3390/rheumato5010001
  42. The impact of cytokines and tumour-conditioned medium on the properties of murine in vitro generated myeloid-derived suppressor cells. Awad M., Sen'kova A.V., Zenkova M.A., Markov O.V. Scandinavian journal of immunology. 2025. V. 101. e70001. DOI: 10.1111/sji.70001
  43. Cold Atmospheric Plasma Jet and Conjugates of Gold Nanoparticles with Tyrp1 Antibodies Efficiently Suppress Growth of B16 Tumor. Biryukov M.M., Schweigert I., Polyakova A.A., Kryackova N.V., Varlamov M., Gorbunova E.A., Epanchintseva A.V., Pyshnaya I.A., Zakrevsky D., Milakhina E., Wang R., Koval O.A. Plasma Medicine. 2025. V. 15. N 1. P. 1-16. DOI: 10.1615/PlasmaMed.2025057895
  44. BAC-browser: the tool for synthetic biology. Semashko T.A., Fisunov G.Yu., Shevelev G.Yu, Govorun V.M. BMC Bioinformatics. 2025. V. 26. P. 27. DOI: 10.1186/s12859-025-06049-9
  45. Enterobacter soli Strain AF-22b-4245: Study of the Genome and the Effect on Wheat Growth. Sokolova E.A., Mishukova O.V., Khlistun I.V., Tromenshleger I.N., Chumanova E.V., Voronina E.N. Microbiology Research. 2025. V. 16. N 2. P. 34. DOI: 10.3390/microbiolres16020034
  46. Pulmozyme Ameliorates LPS-Induced Lung Fibrosis but Provokes Residual Inflammation by Modulating Cell-Free DNA Composition and Controlling Neutrophil Phenotype. Alekseeva L.A., Sen'kova A.V., Sounbuli K., Savin I.A., Zenkova M.A., Mironova N.L. Biomolecules. 2025. V. 15. N 2. P. 298. DOI: 10.3390/biom15020298
  47. Cell Death of Tumor Melanocytes and Treatment Options. Koval O.A., Zhilnikova M., Balantaeva M.N., Biryukov M.M., Atamanov V.V. BIOCELL. 2025. V. 49. P. 1-25. DOI: 10.32604/biocell.2025.059987
  48. The hidden elephant: Modified abasic sites and their consequences. Yudkina A.V., Zharkov D.O. DNA Repair. 2025. V. 148. P. 103823. DOI: 10.1016/j.dnarep.2025.103823
  49. The effect of methylation and hydroxymethylation of cytosine on activity and fidelity of Pol λ and Pol β. Shilkin E.S., Petrova D.V., Kruchinin A.A., Zharkov D.O., Makarova A.V. DNA Repair. 2025. V. 148. P. 103815. DOI: 10.1016/j.dnarep.2025.103815
  50. Genome-wide analysis of Ca2+ ATPases and their salt stress responses in sugar beet. Liu S., Chen S., Grin I.R., DuanMu H., Li H. Sugar Tech. 2025. V. 27. N 2. P. 488-505. DOI: 10.1007/s12355-024-01518-6
  51. Sequences in the Cytoplasmic Tail Contribute to the Intracellular Trafficking and the Cell Surface Localization of SARS-CoV-2 Spike Protein. Burkova E.E., Bakhno I.A. Biomolecules. 2025. V. 15. N 2. P. 280. DOI: 10.3390/biom15020280
  52. Synthesis of Magnetic Nanoparticles Coated with Human Serum Albumin and Loaded by Doxorubicin. Petrov K.D., Ryabova E.S., Dmitrienko E.V., Chubarov A.S. Magnetochemistry. 2025. V. 11. N 2. P. 13. DOI: 10.3390/magnetochemistry11020013
  53. HPF1 Regulates Pol β Efficiency in Nucleosomes via the Modulation of Total Poly(ADP-Ribose) Synthesis. Kutuzov M.M., Sayfullina D.I., Belousova E.A., Lavrik O.I. Int. J. Mol. Sci. 2025. V. 26. N 5. P. 1794. DOI: 10.3390/ijms26051794
  54. Transgenic iPSC Lines with Genetically Encoded MitoTimer to Study Mitochondrial Biogenesis in Dopaminergic Neurons with Tauopathy. Nadtochy J.A., Medvedev S.P., Grigoryeva E.V., Pavlova S.V., Minina J.M., Chechushkov A.V., Malakhova A.A., Kovalenko L.V., Zakiyan S.M. Biomedicines. 2025. V. 13. N 3. P. 550. DOI: 10.3390/biomedicines13030550
  55. Preparation of Boron-Containing S-Nitrosothiol Based on Homocysteinylamides of Human Serum Albumin for Combined NO-Chemical and Boron-Neutron-Capture Therapy. Popova T.V., Van M., Kurochkin T. N., Tsyrempilov S.A., Zakharova O., Silnikov V.N., Godovikova T.S. Russ. J. Bioorganic Chem. 2025. V. 51. N 1. P. 1–14. DOI: 10.1134/S1068162025010194
  56. Временные параметры моделирования болезни Блаунта в эксперименте. Строкова Е.Л., Пахомова Н.Ю., Черноловская Е.Л., Жуков Д.В., Кожевников В.В., Гутт А.А., Корыткин А.А. Современные проблемы науки и образования. 2025. № 1. С. 1-11. DOI: 10.17513/spno.33795
  57. Influence of pre-analytical conditions on cell-free microRNA stability in blood plasma samples. Pabón B.M., Zaporozhchenko I.A., Konoshenko M.Y., Murina E.A., Bryzgunova O.E., Laktionov P.P. exRNA. 2025. N 1. P. 0005. DOI: 10.55092/exrna20250005
  58. Synthesis and Physicochemical Properties of New Phosphoramide Oligodeoxyribonucleotides. I. N-Caffeine Derivatives. Novgorodceva A.I., Vorob’ev, A.Y., Lomzov A.A., Vasilyeva S.V. Bioorg. Chem. 2025. V. 157. P. 108313. DOI: 10.1016/j.bioorg.2025.108313
  59. ДНК-метабаркодинг макробеспозвоночных в системе биомониторинга озера Байкал. Кравцова Л.С., Перетолчина Т.Е., Трибой Т.И., Коваленкова М.В., Небесных И.А., Тупикин А.Е., Кабилов М.Р. Известия Российской академии наук. Серия биологическая. 2025. № 1. С. 84-97. DOI: 10.31857/S1026347025010087
  60. Developing plant-derived DNA repair enzyme resources through studying the involvement of base excision repair DNA glycosylases in stress response. Zhao Y., Chen D., Grin I.R., Zharkov D.O., Yu B. Physiol. Plant. 2025. V. 177. N 2. e70162. DOI: 10.1111/ppl.70162
  61. EndoGene database: reported genetic variants for 5,926 Russian patients diagnosed with endocrine disorders. Buzdin A., Zolotovskaia M., Roumiantsev S.A., Emelyanova A.G., Zolotovskaia M., Roumiantsev S.A., Emelyanova A.G., Golounina O.O., Pugacheva P., Luppov D., Kuzminyh A.V., Alexeeva A.O., Emelianova A.A., Novoselov A.L., Matrosova A., Slepukhina A.A., Popov S., Plaksina E.V., Petrov V.M., Guselnikova A.R., Shagina A.D., Suntsova M., Zakharova V., Belaya Z., Vorontsova M., Melnichenko G.A., Mokryscheva V.P., Chehonin V.P., Dedov I.I. Frontiers in Endocrinology. 2025. V. 16. P. 1472754. DOI: 10.3389/fendo.2025.1472754
  62. Создание и характеристика семи линий индуцированных плюрипотентных стволовых клеток от двух пациентов с болезнью Паркинсона, несущих вариант c.1087G>T гена LGR4. Подвысоцкая В.С., Григорьева Е.В., Малахова А.А., Минина Ю.М., Вяткин Ю.В., Хабарова Е.А., Рзаев Дж.А., Медведев С.П., Коваленко Л.В., Закиян С.М. Вавиловский журнал генетики и селекции. 2025. Т. 29. № 1. С. 15-25. DOI: 10.18699/vjgb-25-03
  63. The Use of Heterologous Antigens for Biopanning Enables the Selection of Broadly Neutralizing Nanobodies Against SARS-CoV-2. Aripov V.S., Zaykovskaya A.V., Mechetina L.V., Najakshin A.M., Bondar A.A., Arkhipov S.G., Mustaev E.A., Ilyina M.G., Borisevich S.S., Ilyichev A.A., Nesmeyanova V. S., Isaeva A.A., Volosnikova E.A., Shcherbakov D.N., Volkova N.V. Antibodies. 2025. V. 14. N 1. P. 23. DOI: 10.3390/antib14010023











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